A currative database for lysosomal storage disorder
The disease is caused by acid sphingomyelinase enzyme (ASMD). ASMD is classified into Niemann-Pick disease (NPD) A and B. NPD A is an early onset neurovisceral form, progressive neurodegeneration and death by 3 years of age. NPD B is a late onset chronic visceral form with broad spectrum severity. The enzyme deficient is called sphingomyelinase encoded by sphingomyelin phosphodiesterase (SMPD1) gene located at 11p15.1-4 (Wasserstein and Schuchman, 1993; McGovern et al., 2017).
Reference :
McGovern, M. M. et al. (2017) ‘Disease manifestations and burden of illness in patients with acid sphingomyelinase deficiency (ASMD)’, Orphanet Journal of Rare Diseases, 12(1), p. 41. doi: 10.1186/s13023-017-0572-x.
Wasserstein, M. P. and Schuchman, E. H. (1993) ‘Acid Sphingomyelinase Deficiency’, in Adam, M. P. et al. (eds) GeneReviews®. Seattle (WA): University of Washington, Seattle. Available at: http://www.ncbi.nlm.nih.gov/books/NBK1370.
Mutation | PhD-SNP | PANTHER | SNPs&GO | SIFT | SNAP | Meta-SNP |
D51V | Disease | Neutral | Neutral | Disease | Disease | Disease |
C91H | Disease | Disease | Disease | Neutral | Disease | Disease |
C94W | Disease | Disease | Disease | Neutral | Disease | Disease |
L105P | Disease | Disease | Disease | Neutral | Disease | Disease |
V132A | Disease | Disease | Disease | Neutral | Disease | Neutral |
L139P | Disease | Disease | Disease | Neutral | Disease | Disease |
C159R | Disease | Disease | Disease | Neutral | Disease | Disease |
L163P | Disease | Neutral | Disease | Neutral | Neutral | Neutral |
G168R | Disease | Neutral | Disease | Neutral | Disease | Disease |
I178N | Disease | Neutral | Disease | Neutral | Disease | Disease |
P186L | Neutral | Disease | Disease | Neutral | Disease | Neutral |
A198P | Neutral | Neutral | Disease | Neutral | Neutral | Neutral |
R202C | Disease | Disease | Disease | Neutral | Disease | Disease |
W211R | Disease | Disease | Disease | Neutral | Disease | Disease |
L216R | Disease | Neutral | Disease | Neutral | Neutral | Neutral |
L227M | Neutral | Neutral | Neutral | Neutral | Disease | Neutral |
L227P | Disease | Disease | Disease | Neutral | Disease | Disease |
C228R | Disease | Disease | Disease | Neutral | Disease | Disease |
R230C | Disease | Disease | Disease | Disease | Disease | Disease |
R230H | Neutral | Disease | Disease | Disease | Disease | Neutral |
G234D | Neutral | Neutral | Disease | Neutral | Disease | Neutral |
A243V | Disease | Disease | Disease | Neutral | Disease | Disease |
G244R | Disease | Disease | Disease | Neutral | Disease | Disease |
W246C | Disease | Disease | Disease | Disease | Disease | Disease |
G247D | Disease | Disease | Disease | Neutral | Disease | Disease |
G247S | Disease | Neutral | Disease | Neutral | Disease | Disease |
E248K | Neutral | Neutral | Disease | Disease | Disease | Disease |
E248Q | Neutral | Neutral | Disease | Disease | Disease | Neutral |
S250R | Neutral | Neutral | Neutral | Disease | Disease | Neutral |
D253E | Disease | Disease | Disease | Disease | Disease | Disease |
D253H | Disease | Disease | Disease | Disease | Disease | Disease |
P255S | Disease | Disease | Disease | Disease | Disease | Disease |
T258I | Neutral | Disease | Disease | Neutral | Neutral | Disease |
D280A | Disease | Disease | Disease | Neutral | Disease | Disease |
P282F | Disease | Disease | Disease | Neutral | Neutral | Disease |
A283T | Neutral | Neutral | Disease | Neutral | Neutral | Disease |
R291H | Neutral | Disease | Disease | Disease | Disease | Disease |
Q294K | Neutral | Neutral | Disease | Disease | Disease | Neutral |
L304P | Disease | Disease | Disease | Neutral | Disease | Disease |
V314M | Disease | Disease | Disease | Disease | Neutral | Disease |
Y315H | Disease | Disease | Disease | Disease | Disease | Disease |
G319R | Disease | Disease | Disease | Neutral | Disease | Disease |
N320D | Disease | Disease | Disease | Neutral | Disease | Disease |
H321Y | Disease | Disease | Disease | Neutral | Disease | Disease |
T324P | Neutral | Disease | Disease | Neutral | Disease | Disease |
P325A | Disease | Disease | Disease | Disease | Disease | Disease |
P332R | Neutral | Neutral | Disease | Neutral | Disease | Neutral |
L343P | Disease | Disease | Disease | Neutral | Disease | Disease |
L343R | Disease | Disease | Disease | Disease | Disease | Disease |
A359D | Disease | Disease | Disease | Neutral | Disease | Disease |
L363R | Disease | Disease | Disease | Neutral | Disease | Disease |
Y369C | Disease | Disease | Disease | Disease | Disease | Disease |
P373S | Neutral | Disease | Disease | Neutral | Neutral | Neutral |
R378H | Disease | Disease | Disease | Neutral | Disease | Disease |
R378L | Disease | Disease | Disease | Neutral | Disease | Disease |
S381P | Disease | Disease | Disease | Neutral | Neutral | Disease |
M384I | Disease | Neutral | Disease | Neutral | Disease | Disease |
N385S | Disease | Neutral | Disease | Neutral | Disease | Disease |
C387R | Disease | Disease | Disease | Disease | Disease | Disease |
N391H | Disease | Disease | Disease | Neutral | Disease | Disease |
N391T | Disease | Disease | Disease | Neutral | Disease | Disease |
W393R | Disease | Disease | Disease | Neutral | Disease | Disease |
W393G | Disease | Disease | Disease | Neutral | Disease | Disease |
A415V | Disease | Disease | Disease | Neutral | Disease | Disease |
H423R | Disease | Disease | Disease | Disease | Disease | Disease |
H423Y | Neutral | Neutral | Disease | Disease | Disease | Neutral |
G426S | Disease | Neutral | Disease | Disease | Disease | Disease |
H427R | Disease | Disease | Disease | Neutral | Disease | Disease |
C433R | Disease | Disease | Disease | Disease | Disease | Disease |
L434P | Disease | Disease | Disease | Disease | Disease | Disease |
W437C | Disease | Disease | Disease | Neutral | Disease | Disease |
S438R | Disease | Disease | Disease | Disease | Disease | Disease |
Y448C | Disease | Disease | Disease | Neutral | Disease | Disease |
L452P | Disease | Disease | Disease | Neutral | Neutral | Disease |
A453D | Disease | Disease | Disease | Neutral | Neutral | Disease |
A454V | Disease | Disease | Disease | Neutral | Neutral | Disease |
G458D | Disease | Disease | Disease | Neutral | Disease | Disease |
F465S | Disease | Disease | Disease | Neutral | Disease | Disease |
Y469S | Disease | Disease | Disease | Neutral | Disease | Disease |
R476Q | Neutral | Neutral | Disease | Neutral | Neutral | Neutral |
R476W | Disease | Disease | Disease | Neutral | Neutral | Disease |
P477L | Disease | Disease | Disease | Neutral | Disease | Disease |
F482L | Neutral | Disease | Disease | Neutral | Disease | Disease |
A484E | Disease | Disease | Disease | Neutral | Disease | Disease |
T488A | Disease | Disease | Disease | Disease | Disease | Disease |
Y490N | Disease | Disease | Disease | Neutral | Disease | Disease |
G492S | Neutral | Neutral | Neutral | Neutral | Neutral | Neutral |
N494I | Disease | Disease | Disease | Neutral | Neutral | Disease |
G496S | Neutral | Neutral | Disease | Disease | Disease | Neutral |
R498H | Disease | Disease | Disease | Disease | Disease | Disease |
R498L | Disease | Disease | Disease | Disease | Disease | Disease |
R498C | Disease | Disease | Disease | Disease | Disease | Disease |
H516Q | Neutral | Neutral | Disease | Neutral | Disease | Neutral |
E517V | Neutral | Disease | Disease | Neutral | Disease | Neutral |
Y519C | Disease | Disease | Disease | Disease | Disease | Disease |
I520L | Neutral | Neutral | Disease | Neutral | Neutral | Neutral |
N522S | Disease | Neutral | Disease | Neutral | Neutral | Neutral |
Q525H | Neutral | Neutral | Disease | Neutral | Neutral | Neutral |
W535R | Disease | Disease | Disease | Disease | Disease | Disease |
Y539H | Disease | Disease | Disease | Disease | Disease | Disease |
N549K | Neutral | Neutral | Disease | Neutral | Neutral | Neutral |
L551P | Disease | Neutral | Disease | Neutral | Disease | Disease |
D565Y | Disease | Disease | Disease | Disease | Disease | Disease |
F572L | Disease | Disease | Disease | Neutral | Neutral | Disease |
H577D | Neutral | Neutral | Disease | Neutral | Neutral | Neutral |
K578N | Disease | Disease | Disease | Disease | Disease | Disease |
G579S | Neutral | Neutral | Neutral | Disease | Disease | Neutral |
Q598R | Neutral | Neutral | Neutral | Disease | Disease | Neutral |
L599F | Neutral | Neutral | Neutral | Neutral | Neutral | Neutral |
R602H | Neutral | Neutral | Neutral | Neutral | Neutral | Neutral |
R602P | Disease | Disease | Disease | Neutral | Neutral | Disease |
R610C | Neutral | Disease | Disease | Disease | Disease | Disease |